STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB83527.1Protein of unknown function. (313 aa)    
Predicted Functional Partners:
SFB83504.1
UDPglucose 6-dehydrogenase.
       0.631
SFB83408.1
Protein of unknown function.
 
     0.605
SFB83540.1
Hypothetical protein.
 
     0.569
SFC13876.1
AAA-like domain-containing protein.
  
     0.508
SFB83250.1
Protein of unknown function.
  
     0.453
SFB83552.1
Hypothetical protein.
       0.427
SFB83570.1
Methyltransferase, FkbM family.
       0.427
SFB87625.1
Uncharacterized conserved protein YtfP, gamma-glutamylcyclotransferase (GGCT)/AIG2-like family.
  
     0.421
SFB83584.1
Hypothetical protein.
       0.417
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.