STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB87874.1Hypothetical protein. (1166 aa)    
Predicted Functional Partners:
SFB85234.1
OmpA family protein.
  
 0.835
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.835
SFB97912.1
Outer membrane protein OmpA.
  
 0.835
SFB87900.1
Hypothetical protein.
       0.786
SFB87890.1
Hypothetical protein.
       0.768
SFC22045.1
Cytochrome c peroxidase.
   
 
 0.721
SFB87916.1
Hypothetical protein.
       0.704
SFC13590.1
Outer membrane protein (porin).
   
 
 0.700
SFC38898.1
Hypothetical protein.
   
 
 0.700
SFB89817.1
Vitamin B12 transporter.
    
 
 0.698
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.