STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB91580.1HD domain-containing protein. (388 aa)    
Predicted Functional Partners:
SFB88588.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.737
SFC48082.1
HD domain-containing protein.
  
     0.654
SFC31150.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 
 0.649
SFC33546.1
Adenylate cyclase.
 
  
  0.629
SFB78285.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
   0.583
SFC46072.1
Adenylate cyclase.
    
  0.579
SFB89216.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.571
SFB79208.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.568
SFC03020.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
  0.568
SFB89386.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.567
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.