STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC12130.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (650 aa)    
Predicted Functional Partners:
SFB79362.1
PAS domain S-box-containing protein.
 
 0.998
SFC27199.1
PAS domain S-box-containing protein.
 
 0.998
SFC44090.1
PAS domain S-box-containing protein.
 
 0.998
SFB78285.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.997
SFC00344.1
PAS domain S-box-containing protein.
 
 0.997
SFC11752.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
 0.997
SFC15944.1
PAS domain S-box-containing protein.
 
 0.997
SFC20347.1
Signal transduction histidine kinase.
 
 0.997
SFC31150.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.996
SFC44472.1
Sensor domain CHASE-containing protein.
 
 0.995
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.