STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC19002.1TraX protein. (254 aa)    
Predicted Functional Partners:
SFC04185.1
Hypothetical protein.
  
     0.643
SFC39874.1
NlpB/DapX lipoprotein.
  
     0.631
SFC27155.1
PilZ domain-containing protein.
  
     0.612
SFC26414.1
Hypothetical protein.
  
     0.592
SFB83164.1
DNA replication terminus site binding protein.
  
     0.585
SFC48082.1
HD domain-containing protein.
  
     0.545
SFC18979.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
       0.536
SFC22355.1
Sel1 repeat-containing protein.
  
     0.499
SFC11857.1
Protein of unknown function.
  
     0.461
SFC32133.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.417
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.