STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC28474.1Chromosome partitioning protein. (255 aa)    
Predicted Functional Partners:
SFC31871.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 0.941
SFB87303.1
ParB/RepB/Spo0J family partition protein; Belongs to the ParB family.
 
 
 0.936
SFC28444.1
tRNA G46 methylase TrmB.
 
   
 0.812
SFC28382.1
Conserved hypothetical protein.
       0.773
SFC28414.1
Bile acid:Na+ symporter, BASS family.
       0.773
SFB89817.1
Vitamin B12 transporter.
    
 
 0.718
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.705
SFB80935.1
Hypothetical protein.
    
 
 0.665
SFC05779.1
Hypothetical protein.
    
 
 0.665
SFC12788.1
NHL repeat-containing protein.
    
 
 0.665
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.