STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC31165.1Protein of unknown function. (178 aa)    
Predicted Functional Partners:
SFC31204.1
Hypothetical protein.
 
   
 0.932
SFC31256.1
SnoaL-like domain-containing protein.
 
   
 0.920
SFC31217.1
Predicted NAD/FAD-binding protein.
 
   
 0.911
SFC31241.1
Short-chain dehydrogenase.
 
   
 0.905
SFC31185.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.873
SFB88201.1
Protein of unknown function.
 
     0.512
SFC31270.1
Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation.
       0.491
SFC31296.1
Hypothetical protein; Belongs to the UPF0229 family.
       0.491
SFC13126.1
Hypothetical protein.
  
     0.456
SFC44735.1
DedD protein.
  
     0.455
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.