STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC38632.1Two-component system, NtrC family, response regulator GlrR. (455 aa)    
Predicted Functional Partners:
SFC27199.1
PAS domain S-box-containing protein.
 
0.942
SFC49677.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 0.940
SFC38565.1
Two-component system, NtrC family, sensor histidine kinase GlrK.
 
 
 0.918
SFC03879.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.906
SFB79362.1
PAS domain S-box-containing protein.
 
0.898
SFB78285.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.892
SFC15944.1
PAS domain S-box-containing protein.
  
 0.884
SFC44090.1
PAS domain S-box-containing protein.
  
0.879
SFC31150.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.876
SFC38645.1
WD40-like Beta Propeller Repeat.
    
 0.850
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.