STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC40884.1DNA-binding transcriptional regulator, CsgD family. (377 aa)    
Predicted Functional Partners:
SFC40903.1
Pimeloyl-ACP methyl ester carboxylesterase.
     
 0.773
SFB79362.1
PAS domain S-box-containing protein.
     
 0.695
SFB82732.1
Response regulator receiver domain-containing protein.
 
 0.690
SFC40866.1
Hypothetical protein.
       0.686
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
    
 
 0.675
SFC01019.1
Glyoxylase, beta-lactamase superfamily II.
    
 
 0.675
SFC12701.1
Glyoxylase, beta-lactamase superfamily II.
    
 
 0.675
SFC19799.1
Glyoxylase, beta-lactamase superfamily II.
    
 
 0.675
SFB88842.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
 0.650
SFC05524.1
Two component transcriptional regulator, LuxR family.
  
 0.650
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.