STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC49952.1Protein of unknown function. (893 aa)    
Predicted Functional Partners:
SFC40405.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.861
SFB78285.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.835
SFB79362.1
PAS domain S-box-containing protein.
   
  0.821
SFC44090.1
PAS domain S-box-containing protein.
   
 0.818
SFC31150.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.795
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 0.788
SFC11752.1
Two-component system, NarL family, sensor histidine kinase BarA.
   
  0.777
SFC20347.1
Signal transduction histidine kinase.
   
  0.777
SFC15944.1
PAS domain S-box-containing protein.
   
 0.756
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.750
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.