STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS28003.1Protein of unknown function. (102 aa)    
Predicted Functional Partners:
SIS28007.1
Protein of unknown function.
 
   
 0.951
SIS28013.1
Bacteroides conjugation system ATPase, TraG family.
 
   
 0.934
SIS28015.1
Bacteroides conjugation system ATPase, TraG family.
 
   
 0.899
SIS28018.1
Protein of unknown function.
 
   
 0.883
traJ
Bacteroides conjugative transposon TraJ protein.
 
   
 0.880
traK-2
Bacteroides conjugative transposon TraK protein.
 
   
 0.880
traM-2
Bacteroides conjugative transposon TraM protein.
 
   
 0.860
traN-2
Bacteroides conjugative transposon TraN protein.
 
   
 0.856
SIS28042.1
Protein of unknown function.
 
   
 0.838
SIS27984.1
Cellulose biosynthesis protein BcsQ.
 
   
 0.830
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.