Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS29204.1 | SIS30960.1 | SAMN05421768_101516 | SAMN05421768_102149 | Glucose-1-phosphate adenylyltransferase. | Hypothetical protein. | 0.416 |
SIS29957.1 | SIS30960.1 | SAMN05421768_101813 | SAMN05421768_102149 | Non-heme chloroperoxidase. | Hypothetical protein. | 0.539 |
SIS30954.1 | SIS30957.1 | SAMN05421768_102147 | SAMN05421768_102148 | Transcriptional regulator, HxlR family. | Short chain dehydrogenase. | 0.680 |
SIS30954.1 | SIS30960.1 | SAMN05421768_102147 | SAMN05421768_102149 | Transcriptional regulator, HxlR family. | Hypothetical protein. | 0.590 |
SIS30957.1 | SIS30954.1 | SAMN05421768_102148 | SAMN05421768_102147 | Short chain dehydrogenase. | Transcriptional regulator, HxlR family. | 0.680 |
SIS30957.1 | SIS30960.1 | SAMN05421768_102148 | SAMN05421768_102149 | Short chain dehydrogenase. | Hypothetical protein. | 0.842 |
SIS30960.1 | SIS29204.1 | SAMN05421768_102149 | SAMN05421768_101516 | Hypothetical protein. | Glucose-1-phosphate adenylyltransferase. | 0.416 |
SIS30960.1 | SIS29957.1 | SAMN05421768_102149 | SAMN05421768_101813 | Hypothetical protein. | Non-heme chloroperoxidase. | 0.539 |
SIS30960.1 | SIS30954.1 | SAMN05421768_102149 | SAMN05421768_102147 | Hypothetical protein. | Transcriptional regulator, HxlR family. | 0.590 |
SIS30960.1 | SIS30957.1 | SAMN05421768_102149 | SAMN05421768_102148 | Hypothetical protein. | Short chain dehydrogenase. | 0.842 |
SIS30960.1 | SIS47324.1 | SAMN05421768_102149 | SAMN05421768_108146 | Hypothetical protein. | Transcriptional regulator, HxlR family. | 0.435 |
SIS30960.1 | SIS47333.1 | SAMN05421768_102149 | SAMN05421768_108147 | Hypothetical protein. | Short chain dehydrogenase. | 0.746 |
SIS47324.1 | SIS30960.1 | SAMN05421768_108146 | SAMN05421768_102149 | Transcriptional regulator, HxlR family. | Hypothetical protein. | 0.435 |
SIS47324.1 | SIS47333.1 | SAMN05421768_108146 | SAMN05421768_108147 | Transcriptional regulator, HxlR family. | Short chain dehydrogenase. | 0.680 |
SIS47333.1 | SIS30960.1 | SAMN05421768_108147 | SAMN05421768_102149 | Short chain dehydrogenase. | Hypothetical protein. | 0.746 |
SIS47333.1 | SIS47324.1 | SAMN05421768_108147 | SAMN05421768_108146 | Short chain dehydrogenase. | Transcriptional regulator, HxlR family. | 0.680 |