Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS31080.1 | ureA | SAMN05421768_102210 | SAMN05421768_102209 | Hypothetical protein. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.475 |
SIS31080.1 | ureB | SAMN05421768_102210 | SAMN05421768_102208 | Hypothetical protein. | Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family. | 0.466 |
SIS31080.1 | ureC | SAMN05421768_102210 | SAMN05421768_102207 | Hypothetical protein. | Urease subunit alpha. | 0.466 |
ureA | SIS31080.1 | SAMN05421768_102209 | SAMN05421768_102210 | Urease subunit gamma; Belongs to the urease gamma subunit family. | Hypothetical protein. | 0.475 |
ureA | ureB | SAMN05421768_102209 | SAMN05421768_102208 | Urease subunit gamma; Belongs to the urease gamma subunit family. | Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family. | 0.999 |
ureA | ureC | SAMN05421768_102209 | SAMN05421768_102207 | Urease subunit gamma; Belongs to the urease gamma subunit family. | Urease subunit alpha. | 0.999 |
ureB | SIS31080.1 | SAMN05421768_102208 | SAMN05421768_102210 | Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family. | Hypothetical protein. | 0.466 |
ureB | ureA | SAMN05421768_102208 | SAMN05421768_102209 | Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.999 |
ureB | ureC | SAMN05421768_102208 | SAMN05421768_102207 | Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family. | Urease subunit alpha. | 0.999 |
ureC | SIS31080.1 | SAMN05421768_102207 | SAMN05421768_102210 | Urease subunit alpha. | Hypothetical protein. | 0.466 |
ureC | ureA | SAMN05421768_102207 | SAMN05421768_102209 | Urease subunit alpha. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.999 |
ureC | ureB | SAMN05421768_102207 | SAMN05421768_102208 | Urease subunit alpha. | Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family. | 0.999 |