STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS31120.1Uncharacterized membrane protein YccC. (754 aa)    
Predicted Functional Partners:
SIS33508.1
Rod shape-determining protein MreD.
  
     0.493
SIS36612.1
Protein TonB.
  
     0.489
SIS52940.1
Protein of unknown function.
  
     0.479
SIS31119.1
Hypothetical protein.
       0.461
SIS59701.1
Protein TonB.
  
     0.459
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.455
SIS28974.1
BlaR1 peptidase M56.
  
     0.452
SIS33221.1
Protein TonB.
  
     0.452
SIS29423.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.442
SIS36606.1
Hypothetical protein; Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain.
  
     0.438
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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