STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS33442.1Quinol:cytochrome c oxidoreductase membrane protein. (173 aa)    
Predicted Functional Partners:
SIS33436.1
Hypothetical protein.
 
 
 0.999
SIS33445.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 
 
 0.999
SIS33448.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
 
 
 0.999
ccoN
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.997
ccoN-2
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.997
SIS33438.1
Cytochrome c, mono-and diheme variants.
 
 
   0.987
SIS33450.1
Cytochrome c2.
 
 
 0.971
SIS52116.1
FixH protein.
 
 
 0.738
SIS52054.1
Cbb3-type cytochrome oxidase component FixQ.
  
 
 0.682
SIS38670.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.626
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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