STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS33906.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
SIS31165.1
Diphosphomevalonate decarboxylase.
 
  
 0.920
SIS48323.1
Diphosphomevalonate decarboxylase.
 
  
 0.920
SIS36232.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
 
 
 0.868
SIS29374.1
Mevalonate kinase.
 
     0.794
fabD
[acyl-carrier-protein] S-malonyltransferase.
       0.786
gldN
Gliding motility associated protien GldN.
  
     0.724
SIS33896.1
Putative porin.
 
     0.719
SIS31937.1
Branched-chain amino acid aminotransferase.
  
     0.710
SIS28425.1
Hypothetical protein.
  
     0.699
SIS33902.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
     0.683
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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