Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS34151.1 | SIS34152.1 | SAMN05421768_103597 | SAMN05421768_103598 | N-Dimethylarginine dimethylaminohydrolase. | Four helix bundle protein. | 0.505 |
SIS34151.1 | SIS34153.1 | SAMN05421768_103597 | SAMN05421768_103599 | N-Dimethylarginine dimethylaminohydrolase. | Hypothetical protein. | 0.680 |
SIS34152.1 | SIS34151.1 | SAMN05421768_103598 | SAMN05421768_103597 | Four helix bundle protein. | N-Dimethylarginine dimethylaminohydrolase. | 0.505 |
SIS34152.1 | SIS34153.1 | SAMN05421768_103598 | SAMN05421768_103599 | Four helix bundle protein. | Hypothetical protein. | 0.452 |
SIS34152.1 | SIS34154.1 | SAMN05421768_103598 | SAMN05421768_103600 | Four helix bundle protein. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.420 |
SIS34152.1 | SIS34155.1 | SAMN05421768_103598 | SAMN05421768_103601 | Four helix bundle protein. | Protein of unknown function. | 0.420 |
SIS34152.1 | SIS34156.1 | SAMN05421768_103598 | SAMN05421768_103602 | Four helix bundle protein. | Hypothetical protein. | 0.420 |
SIS34152.1 | SIS34157.1 | SAMN05421768_103598 | SAMN05421768_103603 | Four helix bundle protein. | Protein of unknown function. | 0.406 |
SIS34152.1 | speE | SAMN05421768_103598 | SAMN05421768_103604 | Four helix bundle protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.406 |
SIS34153.1 | SIS34151.1 | SAMN05421768_103599 | SAMN05421768_103597 | Hypothetical protein. | N-Dimethylarginine dimethylaminohydrolase. | 0.680 |
SIS34153.1 | SIS34152.1 | SAMN05421768_103599 | SAMN05421768_103598 | Hypothetical protein. | Four helix bundle protein. | 0.452 |
SIS34153.1 | SIS34154.1 | SAMN05421768_103599 | SAMN05421768_103600 | Hypothetical protein. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.709 |
SIS34153.1 | SIS34155.1 | SAMN05421768_103599 | SAMN05421768_103601 | Hypothetical protein. | Protein of unknown function. | 0.709 |
SIS34153.1 | SIS34156.1 | SAMN05421768_103599 | SAMN05421768_103602 | Hypothetical protein. | Hypothetical protein. | 0.709 |
SIS34153.1 | SIS34157.1 | SAMN05421768_103599 | SAMN05421768_103603 | Hypothetical protein. | Protein of unknown function. | 0.681 |
SIS34153.1 | SIS34159.1 | SAMN05421768_103599 | SAMN05421768_103605 | Hypothetical protein. | Protoporphyrinogen oxidase. | 0.619 |
SIS34153.1 | SIS34160.1 | SAMN05421768_103599 | SAMN05421768_103606 | Hypothetical protein. | Hypothetical protein. | 0.619 |
SIS34153.1 | SIS34161.1 | SAMN05421768_103599 | SAMN05421768_103607 | Hypothetical protein. | F5/8 type C domain-containing protein. | 0.550 |
SIS34153.1 | speE | SAMN05421768_103599 | SAMN05421768_103604 | Hypothetical protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.681 |
SIS34154.1 | SIS34152.1 | SAMN05421768_103600 | SAMN05421768_103598 | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Four helix bundle protein. | 0.420 |
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