STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS36323.1Site-specific DNA recombinase. (524 aa)    
Predicted Functional Partners:
SIS36321.1
Site-specific recombinase XerD.
  
    0.521
SIS28176.1
PRTRC system protein E.
  
     0.506
SIS28165.1
PRTRC system protein B.
  
     0.495
SIS28173.1
PRTRC system protein C.
  
     0.493
SIS28162.1
PRTRC system ThiF family protein.
 
     0.473
SIS27965.1
Helicase conserved C-terminal domain-containing protein.
 
   
 0.467
SIS63019.1
Site-specific DNA recombinase.
  
     0.409
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.