Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS28362.1 | SIS30715.1 | SAMN05421768_101253 | SAMN05421768_10275 | SusD family protein. | SusD family protein. | 0.486 |
SIS28362.1 | SIS36889.1 | SAMN05421768_101253 | SAMN05421768_105495 | SusD family protein. | Starch-binding associating with outer membrane. | 0.525 |
SIS28362.1 | SIS36912.1 | SAMN05421768_101253 | SAMN05421768_105502 | SusD family protein. | Susd and RagB outer membrane lipoprotein. | 0.411 |
SIS28362.1 | SIS36915.1 | SAMN05421768_101253 | SAMN05421768_105503 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.544 |
SIS28362.1 | SIS40300.1 | SAMN05421768_101253 | SAMN05421768_106377 | SusD family protein. | Hypothetical protein. | 0.508 |
SIS28362.1 | SIS46708.1 | SAMN05421768_101253 | SAMN05421768_10874 | SusD family protein. | SusD family protein. | 0.486 |
SIS28362.1 | SIS61428.1 | SAMN05421768_101253 | SAMN05421768_11315 | SusD family protein. | Starch-binding associating with outer membrane. | 0.519 |
SIS30715.1 | SIS28362.1 | SAMN05421768_10275 | SAMN05421768_101253 | SusD family protein. | SusD family protein. | 0.486 |
SIS30715.1 | SIS36915.1 | SAMN05421768_10275 | SAMN05421768_105503 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.501 |
SIS33631.1 | SIS36915.1 | SAMN05421768_103346 | SAMN05421768_105503 | Susd and RagB outer membrane lipoprotein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.655 |
SIS36889.1 | SIS28362.1 | SAMN05421768_105495 | SAMN05421768_101253 | Starch-binding associating with outer membrane. | SusD family protein. | 0.525 |
SIS36889.1 | SIS36915.1 | SAMN05421768_105495 | SAMN05421768_105503 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.689 |
SIS36889.1 | SIS39287.1 | SAMN05421768_105495 | SAMN05421768_106233 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.455 |
SIS36912.1 | SIS28362.1 | SAMN05421768_105502 | SAMN05421768_101253 | Susd and RagB outer membrane lipoprotein. | SusD family protein. | 0.411 |
SIS36912.1 | SIS36915.1 | SAMN05421768_105502 | SAMN05421768_105503 | Susd and RagB outer membrane lipoprotein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.943 |
SIS36912.1 | SIS39287.1 | SAMN05421768_105502 | SAMN05421768_106233 | Susd and RagB outer membrane lipoprotein. | Starch-binding associating with outer membrane. | 0.400 |
SIS36912.1 | SIS40300.1 | SAMN05421768_105502 | SAMN05421768_106377 | Susd and RagB outer membrane lipoprotein. | Hypothetical protein. | 0.574 |
SIS36915.1 | SIS28362.1 | SAMN05421768_105503 | SAMN05421768_101253 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.544 |
SIS36915.1 | SIS30715.1 | SAMN05421768_105503 | SAMN05421768_10275 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.501 |
SIS36915.1 | SIS33631.1 | SAMN05421768_105503 | SAMN05421768_103346 | TonB-linked outer membrane protein, SusC/RagA family. | Susd and RagB outer membrane lipoprotein. | 0.655 |
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