STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS42630.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SIS42638.1
Hypothetical protein.
       0.773
SIS42621.1
Hypothetical protein.
 
     0.646
SIS33238.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
   
    0.534
SIS42773.1
RNA ligase, Rnl2 family.
  
     0.486
SIS42646.1
Hypothetical protein.
       0.480
SIS42655.1
Sec-independent protein translocase TatD.
       0.439
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.