STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS47621.1MG2 domain-containing protein. (2032 aa)    
Predicted Functional Partners:
SIS47629.1
Hypothetical protein.
       0.697
SIS47637.1
Hypothetical protein.
       0.590
SIS47611.1
CubicO group peptidase, beta-lactamase class C family.
       0.518
SIS34829.1
Uncharacterized conserved protein, DUF1501 family.
  
     0.461
SIS35151.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.430
SIS47645.1
Hypothetical protein.
       0.428
SIS34830.1
Uncharacterized conserved protein, DUF1800 family.
  
     0.414
SIS43328.1
Protein of unknown function.
  
     0.414
SIS34546.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.