STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS48590.1DinB superfamily protein. (156 aa)    
Predicted Functional Partners:
SIS48600.1
Hypothetical protein.
 
     0.651
SIS48596.1
23S rRNA (guanosine2251-2'-O)-methyltransferase.
       0.538
SIS34546.1
Hypothetical protein.
  
     0.526
SIS59837.1
Lipocalin-like domain-containing protein.
  
     0.455
SIS43349.1
Hypothetical protein.
  
     0.434
SIS33068.1
Hypothetical protein.
  
     0.422
SIS56595.1
Peroxiredoxin.
  
     0.414
SIS32795.1
Cell division protein FtsQ.
  
     0.410
SIS34008.1
Hypothetical protein.
  
     0.410
SIS36752.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.