STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS50684.1Phytoene dehydrogenase-related protein. (505 aa)    
Predicted Functional Partners:
SIS50665.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.951
SIS50702.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.879
SIS50722.1
Acyl carrier protein.
 
     0.857
SIS50796.1
Dehydrogenase (flavoprotein).
 
  
 0.835
SIS50250.1
Hypothetical protein.
 
   
 0.814
SIS50268.1
Hypothetical protein.
 
   
 0.797
SIS50299.1
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
 
     0.792
SIS50582.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
     0.792
SIS50497.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.791
SIS50447.1
Hypothetical protein.
 
     0.790
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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