STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE37462.1Pimeloyl-ACP methyl ester carboxylesterase. (297 aa)    
Predicted Functional Partners:
SHF40788.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.960
SHE59542.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
   
 0.943
SHF43843.1
Amino acid adenylation domain-containing protein.
  
 0.838
SHE68680.1
Fengycin family lipopeptide synthetase D/tyrocidine synthetase-2.
  
 0.835
SHE68728.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.828
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.746
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
     
 0.740
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.738
SHE41213.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.730
SHF43054.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.672
Your Current Organism:
Seinonella peptonophila
NCBI taxonomy Id: 112248
Other names: ATCC 27302, DSM 44666, JCM 10113, KCTC 9740, S. peptonophila, Thermoactinomyces peptonophilus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.