STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE67091.1N2,N2-dimethylguanosine tRNA methyltransferase. (237 aa)    
Predicted Functional Partners:
SHE67066.1
Dephospho-CoA kinase.
       0.773
SHE67022.1
Hypothetical protein.
       0.584
SHE67045.1
Sigma-70, region 4.
       0.584
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.576
SHE67141.1
Hypothetical protein.
       0.576
SHE67168.1
Ribonucleoside-diphosphate reductase alpha chain/ribonucleoside-triphosphate reductase.
       0.456
SHE67187.1
Hypothetical protein.
       0.451
SHE67209.1
Hypothetical protein.
       0.451
SHE67237.1
Hypothetical protein.
       0.451
SHE67250.1
Hypothetical protein.
       0.451
Your Current Organism:
Seinonella peptonophila
NCBI taxonomy Id: 112248
Other names: ATCC 27302, DSM 44666, JCM 10113, KCTC 9740, S. peptonophila, Thermoactinomyces peptonophilus
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