STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF28462.1Cytochrome P450. (389 aa)    
Predicted Functional Partners:
SHF40788.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.999
SHE59542.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.998
SHF43843.1
Amino acid adenylation domain-containing protein.
  
 0.995
SHE38790.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.913
SHE68903.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.913
SHE68963.1
Amino acid adenylation domain-containing protein.
  
 0.913
SHF44757.1
HxxPF-repeated domain-containing protein.
  
 0.913
SHE68680.1
Fengycin family lipopeptide synthetase D/tyrocidine synthetase-2.
  
 0.909
SHF40806.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.908
SHF43864.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.907
Your Current Organism:
Seinonella peptonophila
NCBI taxonomy Id: 112248
Other names: ATCC 27302, DSM 44666, JCM 10113, KCTC 9740, S. peptonophila, Thermoactinomyces peptonophilus
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