STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422765_00366Unannotated protein. (144 aa)    
Predicted Functional Partners:
GCA_000422765_00367
Unannotated protein.
 
 
 0.998
GCA_000422765_02202
Unannotated protein.
  
 0.998
GCA_000422765_00365
Unannotated protein.
 
 
 0.986
GCA_000422765_03380
Unannotated protein.
 
 0.985
GCA_000422765_03382
Unannotated protein.
 
 
 0.978
GCA_000422765_01093
Unannotated protein.
 
 
 0.977
GCA_000422765_00371
Unannotated protein.
 
 
 0.974
GCA_000422765_03393
Unannotated protein.
 
 
 0.968
GCA_000422765_02455
Unannotated protein.
   
 0.964
GCA_000422765_03379
Unannotated protein.
 
 0.963
Your Current Organism:
Neptunomonas japonica
NCBI taxonomy Id: 1122599
Other names: N. japonica DSM 18939, Neptunomonas japonica DSM 18939, Neptunomonas japonica JAMM 0745, Neptunomonas sp. JAMM 0745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.