STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422765_03206Unannotated protein. (677 aa)    
Predicted Functional Partners:
GCA_000422765_00300
Unannotated protein.
 
 
 0.998
GCA_000422765_00500
Unannotated protein.
 
 
 0.998
GCA_000422765_00370
Unannotated protein.
 
 0.997
GCA_000422765_03375
Unannotated protein.
 
 
0.997
GCA_000422765_01399
Unannotated protein.
  
 0.996
GCA_000422765_03121
Unannotated protein.
  
 
 0.994
GCA_000422765_03720
Unannotated protein.
   
 0.984
GCA_000422765_02953
Unannotated protein.
 
 
 0.968
GCA_000422765_03508
Unannotated protein.
   
 0.949
GCA_000422765_03208
Unannotated protein.
 
  
 0.930
Your Current Organism:
Neptunomonas japonica
NCBI taxonomy Id: 1122599
Other names: N. japonica DSM 18939, Neptunomonas japonica DSM 18939, Neptunomonas japonica JAMM 0745, Neptunomonas sp. JAMM 0745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.