STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420645_00578Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_000420645_00804
Unannotated protein.
   
 0.913
GCA_000420645_02736
Unannotated protein.
  
 
  0.791
GCA_000420645_00577
Unannotated protein.
       0.773
GCA_000420645_01842
Unannotated protein.
    
  0.746
GCA_000420645_01817
Unannotated protein.
  
 
  0.745
GCA_000420645_03572
Unannotated protein.
  
 
  0.728
GCA_000420645_00803
Unannotated protein.
   
 0.676
GCA_000420645_02095
Unannotated protein.
  
 
  0.670
GCA_000420645_03074
Unannotated protein.
  
  
  0.663
GCA_000420645_02138
Unannotated protein.
 
 
  0.646
Your Current Organism:
Nevskia ramosa
NCBI taxonomy Id: 1122603
Other names: N. ramosa DSM 11499, Nevskia ramosa DSM 11499
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.