STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374125_00357Unannotated protein. (595 aa)    
Predicted Functional Partners:
GCA_000374125_04410
Unannotated protein.
    
  0.749
GCA_000374125_00356
Unannotated protein.
 
     0.569
GCA_000374125_00110
Unannotated protein.
    
  0.568
GCA_000374125_02812
Unannotated protein.
  
 
 0.535
GCA_000374125_02593
Unannotated protein.
 
 
 0.526
GCA_000374125_04832
Unannotated protein.
 
  
 0.473
GCA_000374125_00595
Unannotated protein.
  
 
 0.468
GCA_000374125_00353
Unannotated protein.
 
     0.461
GCA_000374125_01875
Unannotated protein.
  
 
 0.433
GCA_000374125_00355
Unannotated protein.
 
     0.430
Your Current Organism:
Niabella aurantiaca
NCBI taxonomy Id: 1122605
Other names: N. aurantiaca DSM 17617, Niabella aurantiaca DSM 17617
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.