STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374125_04869Unannotated protein. (556 aa)    
Predicted Functional Partners:
GCA_000374125_02505
Unannotated protein.
  
     0.724
GCA_000374125_02159
Unannotated protein.
    
  0.593
GCA_000374125_01236
Unannotated protein.
    
 0.579
GCA_000374125_02669
Unannotated protein.
    
 0.579
GCA_000374125_01358
Unannotated protein.
    
  0.570
GCA_000374125_01360
Unannotated protein.
    
  0.570
GCA_000374125_01971
Unannotated protein.
    
  0.570
GCA_000374125_04020
Unannotated protein.
    
  0.552
GCA_000374125_04088
Unannotated protein.
  
  
  0.531
GCA_000374125_04867
Unannotated protein.
       0.497
Your Current Organism:
Niabella aurantiaca
NCBI taxonomy Id: 1122605
Other names: N. aurantiaca DSM 17617, Niabella aurantiaca DSM 17617
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.