STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_01772Unannotated protein. (153 aa)    
Predicted Functional Partners:
GCA_000426505_01773
Unannotated protein.
  
  
 0.995
GCA_000426505_01775
Unannotated protein.
 
  
 0.941
GCA_000426505_01777
Unannotated protein.
 
 
 
 0.935
GCA_000426505_01786
Unannotated protein.
 
  
 0.935
GCA_000426505_01785
Unannotated protein.
 
   
 0.919
GCA_000426505_01782
Unannotated protein.
 
   
 0.916
GCA_000426505_01779
Unannotated protein.
 
   
 0.912
GCA_000426505_01776
Unannotated protein.
  
  
 0.905
GCA_000426505_01780
Unannotated protein.
 
   
 0.900
GCA_000426505_01781
Unannotated protein.
     
 0.899
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.