STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_01834Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000426505_01833
Unannotated protein.
 
     0.742
GCA_000426505_00085
Unannotated protein.
 
  
 0.698
GCA_000426505_01822
Unannotated protein.
 
     0.691
GCA_000426505_01823
Unannotated protein.
 
     0.683
GCA_000426505_01825
Unannotated protein.
 
     0.633
GCA_000426505_01826
Unannotated protein.
 
     0.593
GCA_000426505_01824
Unannotated protein.
 
     0.590
GCA_000426505_01827
Unannotated protein.
 
     0.576
GCA_000426505_01831
Unannotated protein.
       0.541
GCA_000426505_00252
Unannotated protein.
 
    0.517
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.