STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_02058Unannotated protein. (477 aa)    
Predicted Functional Partners:
GCA_000426505_02298
Unannotated protein.
  
  0.925
GCA_000426505_01256
Unannotated protein.
 
  0.923
GCA_000426505_00408
Unannotated protein.
  
  
 
0.922
GCA_000426505_00521
Unannotated protein.
  0.922
GCA_000426505_02299
Unannotated protein.
 
  0.921
GCA_000426505_01255
Unannotated protein.
 
  0.917
GCA_000426505_00522
Unannotated protein.
  0.913
GCA_000426505_03294
Unannotated protein.
    
 0.910
GCA_000426505_00974
Unannotated protein.
   
 
  0.906
GCA_000426505_01926
Unannotated protein.
     
 0.906
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.