STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426505_03390Unannotated protein. (146 aa)    
Predicted Functional Partners:
GCA_000426505_02925
Unannotated protein.
     0.950
GCA_000426505_00978
Unannotated protein.
    
 0.682
GCA_000426505_01106
Unannotated protein.
  
  
  0.582
GCA_000426505_02124
Unannotated protein.
    
  0.538
GCA_000426505_04094
Unannotated protein.
    
  0.525
GCA_000426505_03080
Unannotated protein.
 
  
  0.478
GCA_000426505_03391
Unannotated protein.
       0.466
GCA_000426505_03389
Unannotated protein.
       0.441
GCA_000426505_02771
Unannotated protein.
   
    0.428
Your Current Organism:
Nisaea denitrificans
NCBI taxonomy Id: 1122607
Other names: N. denitrificans DSM 18348, Nisaea denitrificans DR41_21, Nisaea denitrificans DSM 18348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.