STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422805_02668Unannotated protein. (697 aa)    
Predicted Functional Partners:
GCA_000422805_02674
Unannotated protein.
 0.997
GCA_000422805_03486
Unannotated protein.
 0.997
GCA_000422805_04442
Unannotated protein.
  
 
 0.929
GCA_000422805_03232
Unannotated protein.
   
 
 0.915
GCA_000422805_03001
Unannotated protein.
 
 
 0.898
GCA_000422805_00197
Unannotated protein.
  
 
 0.773
GCA_000422805_02902
Unannotated protein.
  
 
 
 0.768
GCA_000422805_02616
Unannotated protein.
  
 0.755
GCA_000422805_02600
Unannotated protein.
     
 0.754
GCA_000422805_03218
Unannotated protein.
   
  
 0.732
Your Current Organism:
Nocardioides halotolerans
NCBI taxonomy Id: 1122609
Other names: N. halotolerans DSM 19273, Nocardioides halotolerans DSM 19273, Nocardioides halotolerans MSL-23, Nocardioides sp. MSL-23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.