STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422805_02705Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000422805_02704
Unannotated protein.
 
  
0.905
GCA_000422805_02706
Unannotated protein.
 
   
 0.855
GCA_000422805_02702
Unannotated protein.
  
     0.671
GCA_000422805_00057
Unannotated protein.
  
 
  0.652
GCA_000422805_00323
Unannotated protein.
  
   0.568
GCA_000422805_02707
Unannotated protein.
       0.486
GCA_000422805_01648
Unannotated protein.
  
    0.451
GCA_000422805_03013
Unannotated protein.
   
    0.449
GCA_000422805_02708
Unannotated protein.
       0.408
Your Current Organism:
Nocardioides halotolerans
NCBI taxonomy Id: 1122609
Other names: N. halotolerans DSM 19273, Nocardioides halotolerans DSM 19273, Nocardioides halotolerans MSL-23, Nocardioides sp. MSL-23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.