STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422805_04012Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_000422805_04013
Unannotated protein.
       0.620
GCA_000422805_00578
Unannotated protein.
  
     0.598
GCA_000422805_04011
Unannotated protein.
       0.517
GCA_000422805_02105
Unannotated protein.
  
     0.466
GCA_000422805_04277
Unannotated protein.
  
     0.463
GCA_000422805_02527
Unannotated protein.
  
     0.453
GCA_000422805_03522
Unannotated protein.
  
     0.453
GCA_000422805_04014
Unannotated protein.
  
    0.436
GCA_000422805_04015
Unannotated protein.
       0.434
GCA_000422805_02987
Unannotated protein.
  
     0.426
Your Current Organism:
Nocardioides halotolerans
NCBI taxonomy Id: 1122609
Other names: N. halotolerans DSM 19273, Nocardioides halotolerans DSM 19273, Nocardioides halotolerans MSL-23, Nocardioides sp. MSL-23
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.