STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422805_04040Unannotated protein. (350 aa)    
Predicted Functional Partners:
GCA_000422805_04041
Unannotated protein.
  
  
 0.977
GCA_000422805_04043
Unannotated protein.
  
    0.843
GCA_000422805_04042
Unannotated protein.
  
    0.826
GCA_000422805_04047
Unannotated protein.
 
  
 0.820
GCA_000422805_04058
Unannotated protein.
  
    0.817
GCA_000422805_03995
Unannotated protein.
 
     0.614
GCA_000422805_02406
Unannotated protein.
  
     0.606
GCA_000422805_00323
Unannotated protein.
 
     0.582
GCA_000422805_00397
Unannotated protein.
 
    0.557
GCA_000422805_04039
Unannotated protein.
       0.542
Your Current Organism:
Nocardioides halotolerans
NCBI taxonomy Id: 1122609
Other names: N. halotolerans DSM 19273, Nocardioides halotolerans DSM 19273, Nocardioides halotolerans MSL-23, Nocardioides sp. MSL-23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.