STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420265_01917Unannotated protein. (189 aa)    
Predicted Functional Partners:
GCA_000420265_01918
Unannotated protein.
 
     0.934
GCA_000420265_01919
Unannotated protein.
 
     0.855
GCA_000420265_01915
Unannotated protein.
 
     0.768
GCA_000420265_01916
Unannotated protein.
       0.733
GCA_000420265_02598
Unannotated protein.
  
     0.660
GCA_000420265_00647
Unannotated protein.
  
     0.658
GCA_000420265_01998
Unannotated protein.
  
     0.652
GCA_000420265_01920
Unannotated protein.
       0.622
GCA_000420265_01488
Unannotated protein.
  
     0.573
GCA_000420265_02825
Unannotated protein.
  
     0.572
Your Current Organism:
Oceanicaulis alexandrii
NCBI taxonomy Id: 1122613
Other names: O. alexandrii DSM 11625, Oceanicaulis alexandrii DSM 11625
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.