STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420265_02690Unannotated protein. (276 aa)    
Predicted Functional Partners:
GCA_000420265_00153
Unannotated protein.
   
   0.893
GCA_000420265_00152
Unannotated protein.
   
 
 0.876
GCA_000420265_00154
Unannotated protein.
   
   0.873
GCA_000420265_02617
Unannotated protein.
   
  0.871
GCA_000420265_00155
Unannotated protein.
   
 
 0.859
GCA_000420265_00150
Unannotated protein.
   
   0.855
GCA_000420265_00156
Unannotated protein.
   
 
 0.837
GCA_000420265_00157
Unannotated protein.
   
   0.834
GCA_000420265_00151
Unannotated protein.
    
   0.827
GCA_000420265_00146
Unannotated protein.
    
   0.816
Your Current Organism:
Oceanicaulis alexandrii
NCBI taxonomy Id: 1122613
Other names: O. alexandrii DSM 11625, Oceanicaulis alexandrii DSM 11625
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.