STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422845_02699Unannotated protein. (1135 aa)    
Predicted Functional Partners:
GCA_000422845_02698
Unannotated protein.
  
 0.952
GCA_000422845_02701
Unannotated protein.
  
 0.867
GCA_000422845_02700
Unannotated protein.
 
  
 0.865
GCA_000422845_01569
Unannotated protein.
    
  0.849
GCA_000422845_03382
Unannotated protein.
    
  0.839
GCA_000422845_02839
Unannotated protein.
    
  0.835
GCA_000422845_01816
Unannotated protein.
 
     0.745
GCA_000422845_02697
Unannotated protein.
 
    
0.673
GCA_000422845_01707
Unannotated protein.
 
     0.668
GCA_000422845_02159
Unannotated protein.
  
 
  0.583
Your Current Organism:
Oceanobacter kriegii
NCBI taxonomy Id: 1122615
Other names: O. kriegii DSM 6294, Oceanobacter kriegii DSM 6294
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.