STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422425_00543Unannotated protein. (298 aa)    
Predicted Functional Partners:
GCA_000422425_01556
Unannotated protein.
 
 
 0.915
GCA_000422425_03142
Unannotated protein.
   
   0.895
GCA_000422425_01613
Unannotated protein.
 
  
 0.867
GCA_000422425_03571
Unannotated protein.
 
  
 0.835
GCA_000422425_03150
Unannotated protein.
  
    0.832
GCA_000422425_01627
Unannotated protein.
 
    0.825
GCA_000422425_00381
Unannotated protein.
 
    0.809
GCA_000422425_01292
Unannotated protein.
  
    0.802
GCA_000422425_00420
Unannotated protein.
   
  
 0.785
GCA_000422425_00475
Unannotated protein.
   
    0.733
Your Current Organism:
Oceanospirillum beijerinckii
NCBI taxonomy Id: 1122616
Other names: O. beijerinckii DSM 7166, Oceanospirillum beijerinckii DSM 7166
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.