STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373745_01538Unannotated protein. (140 aa)    
Predicted Functional Partners:
GCA_000373745_01537
Unannotated protein.
 
     0.947
GCA_000373745_00762
Unannotated protein.
  
 
 0.933
rpoC
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.886
rpoB
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.879
cheR
Unannotated protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
    
   0.859
rpoA
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.852
rpoZ
Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.851
GCA_000373745_01001
Unannotated protein.
  
 
 0.827
Int-Tn
Unannotated protein; Belongs to the 'phage' integrase family.
  
    0.774
GCA_000373745_01536
Unannotated protein.
  
     0.774
Your Current Organism:
Oligella ureolytica
NCBI taxonomy Id: 1122619
Other names: O. ureolytica DSM 18253, Oligella ureolytica DSM 18253, Oligella ureolytica str. DSM 18253, Oligella ureolytica strain DSM 18253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.