STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421185_00491Unannotated protein. (265 aa)    
Predicted Functional Partners:
GCA_000421185_01332
Unannotated protein.
 0.992
GCA_000421185_03203
Unannotated protein.
 0.980
GCA_000421185_02016
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.979
GCA_000421185_02787
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.979
GCA_000421185_03198
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.979
GCA_000421185_00066
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.977
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.936
rpmG
Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.935
rpsO
Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
 
 0.935
rpmJ
Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.933
Your Current Organism:
Ornithinimicrobium pekingense
NCBI taxonomy Id: 1122622
Other names: O. pekingense DSM 21552, Ornithinimicrobium pekingense DSM 21552, Ornithinimicrobium pekingense LW6, Ornithinimicrobium pekingense str. DSM 21552, Ornithinimicrobium pekingense strain DSM 21552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.