STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421185_01338Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000421185_01336
Unannotated protein.
 
 0.995
GCA_000421185_01335
Unannotated protein.
 
 0.981
GCA_000421185_02962
Unannotated protein.
  0.912
GCA_000421185_00773
Unannotated protein.
 
  0.907
GCA_000421185_02424
Unannotated protein.
 
  0.900
GCA_000421185_03295
Unannotated protein.
 
   
  0.840
GCA_000421185_01337
Unannotated protein.
 
    
0.809
GCA_000421185_03368
Unannotated protein.
  
  0.806
GCA_000421185_01339
Unannotated protein.
       0.773
GCA_000421185_03095
Unannotated protein.
 
   
  0.759
Your Current Organism:
Ornithinimicrobium pekingense
NCBI taxonomy Id: 1122622
Other names: O. pekingense DSM 21552, Ornithinimicrobium pekingense DSM 21552, Ornithinimicrobium pekingense LW6, Ornithinimicrobium pekingense str. DSM 21552, Ornithinimicrobium pekingense strain DSM 21552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.