STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421185_02366Unannotated protein. (263 aa)    
Predicted Functional Partners:
GCA_000421185_00921
Unannotated protein.
    
   0.919
GCA_000421185_02120
Unannotated protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.919
GCA_000421185_01612
Unannotated protein.
 
     0.722
GCA_000421185_00436
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.565
GCA_000421185_00437
Unannotated protein.
  
 
 0.565
GCA_000421185_02367
Unannotated protein.
       0.531
GCA_000421185_02368
Unannotated protein.
       0.485
GCA_000421185_01408
Unannotated protein.
  
     0.478
GCA_000421185_01405
Unannotated protein.
 
     0.470
GCA_000421185_00544
Unannotated protein.
  
 
  0.447
Your Current Organism:
Ornithinimicrobium pekingense
NCBI taxonomy Id: 1122622
Other names: O. pekingense DSM 21552, Ornithinimicrobium pekingense DSM 21552, Ornithinimicrobium pekingense LW6, Ornithinimicrobium pekingense str. DSM 21552, Ornithinimicrobium pekingense strain DSM 21552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.