STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421185_02534Unannotated protein. (362 aa)    
Predicted Functional Partners:
GCA_000421185_02535
Unannotated protein.
 
 0.994
GCA_000421185_02537
Unannotated protein.
 
 0.992
GCA_000421185_00370
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.971
GCA_000421185_02696
Unannotated protein.
 
 0.970
GCA_000421185_02536
Unannotated protein.
 
 
 0.960
GCA_000421185_00369
Unannotated protein.
 
 0.948
GCA_000421185_02697
Unannotated protein.
 
 0.940
GCA_000421185_02538
Unannotated protein.
 
  
 0.833
GCA_000421185_02533
Unannotated protein.
       0.489
icmF
Unannotated protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.468
Your Current Organism:
Ornithinimicrobium pekingense
NCBI taxonomy Id: 1122622
Other names: O. pekingense DSM 21552, Ornithinimicrobium pekingense DSM 21552, Ornithinimicrobium pekingense LW6, Ornithinimicrobium pekingense str. DSM 21552, Ornithinimicrobium pekingense strain DSM 21552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.