Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rplR | GCA_000421185_00440 | GCA_000421185_00016 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| rplM | rpmB | GCA_000421185_00440 | GCA_000421185_00834 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.997 |
| rplM | rpmE | GCA_000421185_00440 | GCA_000421185_03227 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Binds the 23S rRNA. | 0.997 |
| rplM | rpmG | GCA_000421185_00440 | GCA_000421185_00061 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family. | 0.997 |
| rplM | rpmJ | GCA_000421185_00440 | GCA_000421185_00008 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.997 |
| rplM | rpsD | GCA_000421185_00440 | GCA_000421185_00005 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
| rplM | rpsF | GCA_000421185_00440 | GCA_000421185_00308 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
| rplM | rpsI | GCA_000421185_00440 | GCA_000421185_00441 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsP | GCA_000421185_00440 | GCA_000421185_00862 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
| rplM | rpsR | GCA_000421185_00440 | GCA_000421185_00310 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.997 |
| rplR | rplM | GCA_000421185_00016 | GCA_000421185_00440 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rplR | rpmB | GCA_000421185_00016 | GCA_000421185_00834 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplR | rpmE | GCA_000421185_00016 | GCA_000421185_03227 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Binds the 23S rRNA. | 0.999 |
| rplR | rpmG | GCA_000421185_00016 | GCA_000421185_00061 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family. | 0.999 |
| rplR | rpmJ | GCA_000421185_00016 | GCA_000421185_00008 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.999 |
| rplR | rpsD | GCA_000421185_00016 | GCA_000421185_00005 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
| rplR | rpsF | GCA_000421185_00016 | GCA_000421185_00308 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
| rplR | rpsI | GCA_000421185_00016 | GCA_000421185_00441 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
| rplR | rpsP | GCA_000421185_00016 | GCA_000421185_00862 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
| rplR | rpsR | GCA_000421185_00016 | GCA_000421185_00310 | Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.996 |
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