STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422885_02562Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_000422885_03605
Unannotated protein.
 
 0.918
GCA_000422885_03894
Unannotated protein.
   
 0.882
GCA_000422885_04321
Unannotated protein.
    
 0.873
GCA_000422885_03604
Unannotated protein.
  
  
 
0.853
GCA_000422885_02561
Unannotated protein.
 
     0.835
GCA_000422885_02847
Unannotated protein.
  
 
 0.798
GCA_000422885_01895
Unannotated protein.
    
 0.764
GCA_000422885_03032
Unannotated protein.
  
  
 
0.722
GCA_000422885_01370
Unannotated protein.
  
  
 
0.720
GCA_000422885_01762
Unannotated protein.
    
  0.716
Your Current Organism:
Ottowia thiooxydans
NCBI taxonomy Id: 1122623
Other names: O. thiooxydans DSM 14619, Ottowia thiooxydans DSM 14619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.